Anqi Wu

Anqi Wu

Anqi Wu, Ph.D.

Assistant Professor

Anqi Wu is an Assistant Professor at the School of Computational Science and Engineering (CSE), Georgia Institute of Technology. She was a Postdoctoral Research Fellow at the Center for Theoretical Neuroscience, the Zuckerman Mind Brain Behavior Institute, Columbia University. She received her Ph.D. degree in Computational and Quantitative Neuroscience and a graduate certificate in Statistics and Machine Learning from Princeton University. Anqi was selected for the 2018 MIT Rising Star in EECS, 2022 DARPA Riser, and 2023 Alfred P. Sloan Fellow. Her research interest is to develop scientifically-motivated Bayesian statistical models to characterize structure in neural data and behavior data in the interdisciplinary field of machine learning and computational neuroscience. She has a general interest in building data-driven models to promote both animal and human studies in the system and cognitive neuroscience.

anqiwu@gatech.edu

323-868-1604

Anqi Wu Research

  • BRAin INtelligence and Machine Learning (BRAINML) Laboratory
  • Research Focus Areas:
    • Machine Learning
    • Neuroscience

    IRI Connections:

    Ankur Singh

    Ankur Singh

    Ankur Singh

    Professor

    Prof. Singh has a joint appointment with the Wallace H. Coulter Department of Biomedical Engineering at Georgia Tech and Emory University.

    Prof. Singh started at Cornell University as an Assistant Professor in 2013 and was promoted with tenure to Associate Professor with joint appointments in the Mechanical Engineering and Biomedical Engineering. At Cornell, he served as the Associate Director of the NIH T32 training grant on Immuno-engineering, executive council of the Center for Immunology, and the Cornell (Ithaca) – Weill Cornell Medicine (NYC) Academic Integration initiative. Prior to joining Cornell, he completed his postdoctoral training in cell mechanobiology, cell-matrix interactions, and stem cell engineering at Georgia Tech in Mechanical Engineering.

    ankur.singh@gatech.edu

    Singh Lab Website

    Research Focus Areas:
    • Bioengineering

    IRI Connections:

    Machelle Pardue

    Machelle Pardue

    Machelle Pardue

    Professor
    Research Career Scientist, Center for Visual and Neurocognitive Rehabilitation

    Dr. Pardue is a Research Career Scientist at the Atlanta VA Medical Center, and a Professor in Wallace H. Coulter Department of Biomedical Engineering at Georgia Institute of Technology and Emory University School of Medicine. Dr. Pardue received her B.S. in zoology from the University of Wyoming and her doctorate in vision science and biology at the University of Waterloo. Her post-doctorate training in visual electrophysiology was completed with Dr. Neal Peachey at Loyola School of Medicine and Hines VA Hospital in Chicago and focused on biocompatibility of retinal prosthetics. Dr. Pardue moved to Atlanta in 2000 to join the Atlanta VA Medical Center and Emory University Department of Ophthalmology. She moved her academic appointment to Biomedical Engineering in 2015. Her research interests are focused on developing treatments for people with vision loss. To this end, she has developed three research themes within her lab: 1) neuroprotective and restorative treatments for retinal degeneration, 2) early detection and treatment of diabetic retinopathy, and 3) retinal mechanisms of refractive development and myopia. Her research has been continuously supported by the Department of Veterans Affairs, NIH, and private companies (1999-present). She has served on several VA and NIH grant review panels and frequently reviews manuscripts for several journals including Journal of Neuroscience, Investigative Ophthalmology and Visual Sciences, Molecular Vision, Vision Research, Journal of Neuroscience Methods, Journal of Neurochemistry and PlosOne.

    machelle.pardue@bme.gatech.edu

    404-385-3666

    Office Location:
    UAW 4104

    Website

  • Related Site
  • Google Scholar

    Research Focus Areas:
    • Neuroscience
    • Regenerative Medicine
    Additional Research:
    Pardue's lab is focused on developing treatments for people with vision loss. Steps to successful treatment require understanding the mechanisms of the disease and characterizing temporal changes to identify therapeutic windows, with the ultimate goal of rehabilitation of visual function. She uses behavioral electrophysiological, morphological, molecular, and imaging approaches to evaluate changes in retinal function and structure. Her research is guided by applying knowledge of retinal circuits and visual processing, often leading to studies of cognition and the interaction of retinal and visual circuits during health and disease. Her studies start in animal models and move to human trials when possible.

    IRI Connections:

    Cassie Mitchell

    Cassie Mitchell

    Cassie Mitchell

    Assistant Professor

    Dr. Cassie S. Mitchell is a research engineer, elite athlete, and mentor. She is a current member of the USA Paralympic team and research faculty in the Wallace H. Coulter Department of Biomedical Engineering at Georgia Institute of Technology and Emory University. At age 18 Cassie was afflicted with Devics Neuromyelitis Optica, leaving her as a quadriplegic and with visual impairments. Her faith and philosophy on life has helped her to overcome the resulting challenges. She graduated with a B.S. in Chemical Engineering from Oklahoma State University and a Ph.D. in Biomedical Engineering from GT/Emory. She enjoys mentoring high school and college students as well as new spinal cord injury patients at Shepherd Center Brain and Spinal Cord Rehabilitiation Hospital, Atlanta, Georgia.

    cassie.mitchell@bme.gatech.edu

    Office Location:
    UAW 3106

    Lab Website

  • Personal Website
  • Google Scholar

    Research Focus Areas:
    • Neuroscience
    Additional Research:
    Cassie Mitchell's research goal centers around expediting clinical translation from bench to bedside using data-enabled prediction. Akin to data-based models used to forecast weather, Cassie's research integrates disparate, multi-scalar experimental and clinical data sets to dynamically forecast disease. Cassie is the principal investigator of the Laboratory for Pathology Dynamics, which uses a combination of computational, analytical, and informatics-based techniques to identify complex disease etiology, predict new therapeutics, and optimize current interventions. Cassie's research has predominantly targeted neuropathology, but her research applications in predictive medicine expand across all clinical specialties.

    IRI Connections:

    Eric Gaucher

    Eric Gaucher

    Eric Gaucher

    Adjunct Associate Professor

    Gaucher was guided in biochemistry by Peter Tipton and Bayesian Theory by George Smith. Gaucher subsequently earned his Ph.D. from the University of Florida under the tutelage of Steve Benner and Michael Miyamoto.[1] Gaucher received the Walter M. Fitch Award from the Society for Molecular Biology and Evolution for his graduate work.[2] He then did postdoctoral work with NASA's Astrobiology Institute in conjunction with a National Research Council Fellowship. After the two-year fellowship, Gaucher served as President of the Foundation for Applied Molecular Evolution.

    Gaucher was hired as an Associate Professor by the Georgia Institute of Technology in 2008 [1][3][4] The Gaucher group conducts basic and applied research at the interface of molecular evolution and synthetic biology. As of February 2016, his h-index, as calculated by Google Scholar, is 25.[5]

    Gaucher is also the founder and president of the early-stage biotechnology company General Genomics. His company exploits novel platforms to engineer proteins for the biomedical and industrial sectors.

    eric.gaucher@biology.gatech.edu

    404-385-3265

    Office Location:
    EBB 5013

    Website

  • http://www.biology.gatech.edu/people/eric-gaucher
  • Google Scholar

    Research Focus Areas:
    • Drug Design, Development and Delivery
    • Molecular Evolution
    • Neuroscience
    Additional Research:
    Our laboratory has diverse research interests including: evolutionary synthetic biology, molecular biology, comparative genomics, computational biology, bioinformatics, biomedicine, molecular evolution and origins of life, and evolution and engineering of protein thermostability.

    IRI Connections:

    Hee Cheol Cho

    Hee Cheol Cho

    Hee Cheol Cho

    Associate Professor
    Urowsky-Sahr Scholar in Pediatric Bioengineering

    Hee Cheol Cho is the Urowsky-Sahr Scholar in Pediatric Bioengineering and Associate Professor in the Department of Biomedical Engineering and Pediatrics. He received his PhD in Physiology from the University of Toronto in 2003.

    HeeCheol.Cho@emory.edu

    404-727-6356

    Office Location:
    Emory HSRB E184

    Website

  • Related Site
  • Cho Lab
  • Google Scholar

    Research Focus Areas:
    • Regenerative Medicine
    Additional Research:
    The Heart Regeneration Lab focuses on using genes and chemicals to pace and regenerate the heart. We are based at Emory University in Pediatrics and BME in the Wallace H. Coulter Department of Biomedical Engineering of Georgia Tech and Emory University.

    IRI Connections:

    Gregory Sawicki

    Gregory Sawicki

    Gregory Sawicki

    Associate Professor; School of Mechanical Engineering & School of Biological Sciences
    Director; PoWeR Lab

    Dr. Gregory S. Sawicki is an Associate Professor at Georgia Tech with appointments in the George W. Woodruff School of Mechanical Engineering and the School of Biological Sciences. He holds a B.S. from Cornell University ('99) and a M.S. in Mechanical Engineering from University of California-Davis ('01). Dr. Sawicki completed his Ph.D. in Human Neuromechanics at the University of Michigan, Ann-Arbor ('07) and was an NIH-funded Post-Doctoral Fellow in Integrative Biology at Brown University ('07-'09). Dr. Sawicki was a faculty member in the Joint Department of Biomedical Engineering at NC State and UNC Chapel Hill from 2009-2017. In summer of 2017, he joined the faculty at Georgia Tech with appointments in Mechanical Engineering 3/4 and Biological Sciences 1/4.

    gregory.sawicki@me.gatech.edu

    404.385.5706

    Office Location:
    GTMI 411

    PoWeR Lab

    Google Scholar

    Research Focus Areas:
    • Human Augmentation
    Additional Research:
    wearable robotics; exoskeletons; locomotion; biomechanics; muscle mechanics

    IRI Connections:

    Annalise Paaby

    Annalise Paaby

    Annalise Paaby

    Assistant Professor

    After studying ecology as a biology major at Swarthmore College, Annalise Paaby learned fly pushing as a technician for Steve DiNardo and then discovered evolutionary genetics as a tech for Paul Schmidt. She joined Paul’s lab as a graduate student and earned her Ph.D. from the University of Pennsylvania in 2009. In 2015, Paaby completed her postdoctoral training with Matt Rockman at New York University and began her appointment at Georgia Tech.

    paaby@gatech.edu

    404-385-4588

    Office Location:
    EBB 3011

    Website

  • http://www.biology.gatech.edu/people/annalise-paaby
  • Google Scholar

    Research Focus Areas:
    • Molecular Evolution
    • Systems Biology
    Additional Research:
    Our lab explores major questions in evolution and quantitative genetics. We work with the nematode wormC. elegansand relatedCaenorhabditisspecies. Current projects include exploring how cryptic alleles in embryogenesis depend on genetic background, how development evolves over time, and the role of molecular mechanisms in trait determination and evolution. We are also interested in how the environment influences trait expression and imposes selection in natural populations, and are conducting field collection trips in the nearby Appalachian foothills.

    IRI Connections:

    Patrick McGrath

    Patrick McGrath

    Patrick McGrath

    Associate Professor

    Patrick McGrath's research group is interested in understanding the genetic basis of heritable behavioral variation. In the current age, it has become cheap and easy to catalog the set of genetic differences between two individuals. But which genetic differences are responsible for generating differences in innate behaviors, including liability to neurological diseases such as autism, bipolar disease, and schizophrenia? How do these causative genetic variants modify a nervous system? Besides their role in disease, genetic variation is the substrate for natural selection. To understand how behavior evolves, we must understand how it varies.

    patrick.mcgrath@biology.gatech.edu

    404-385-0071

    Office Location:
    EBB 3013

    Website

  • http://biosciences.gatech.edu/people/patrick-mcgrath
  • Google Scholar

    Research Focus Areas:
    • Molecular Evolution
    • Neuroscience
    • Systems Biology
    Additional Research:
    Mostbiological traits have a strong genetic, or heritable, component. Understanding how genetic variation influences these phenotypes will be important for understanding common, heritable diseases like autism.However, the genetic architecture controlling most biological traits is incredibly complex - hundreds of interacting genes and variants combine in unknown ways to create phenotype.The McGrath lab is interested in using fundamentalmechanistic studies inC. elegansto identify, predict, and understand how genetic variation impacts the function of the nervous system.We are studying laboratory adapted strains and harnessing directed evolution experiments to understand how genetic changes affect development, reproduction, and lifespan. We combine quantitative genetics, CRISPR/Cas9, genomics, and computational approaches to address these questions.We believe this work will lead to insights into evolution, multigenic disease, and systems biology.

    IRI Connections:

    Brian Hammer

    Brian Hammer

    Brian Hammer

    Associate Professor

    Brian Hammer's lab studies molecular mechanisms important for microbial interactions. Bacteria are genetically encoded with regulatory networks to integrate external information that tailors gene expression to particular niches. Bacteria use chemical signals to orchestrate behaviors that facilitate both cooperation and conflict with members of the communities they inhabit. The group uses genetics and genomics, biochemistry, bioinformatics, and ecological approaches with a focus on the waterborne pathogen Vibrio cholerae.

    brian.hammer@biology.gatech.edu

    404-385-7701

    Office Location:
    Cherry Emerson 223

    Website

  • http://biosciences.gatech.edu/people/brian-hammer
  • Google Scholar

    Additional Research:
    Microbiology, quorum sensing, regulatory small RNAs, signal transduction, host-pathogen interactions, microbial biofilms. Our lab studies molecular mechanisms important for microbial interactions. Bacteria are genetically encoded with regulatory networks to integrate external information that tailors gene expression to particular niches. Bacteria use chemical signals to orchestrate behaviors that facilitate both cooperation and conflict with members of the communities they inhabit. We use genetics and genomics, biochemistry, bioinformatics, and ecological approaches with a focus on the waterborne pathogenVibrio cholerae.

    IRI Connections: