2024 BioE Day

Presentations from the 2023 BioE Award Winners, featured BioE Alum Seminars, and a Rapid Fire Thesis Competition. Lunch served (while supplies last!).

New Electron Videography Technique Captures Dance Between Proteins and Lipids

Aditi Das

A computational model, based on raw video from electron videography, showing the motion of a nanodisc composed of lipids (red) and a membrane protein (green) in water.

GIF courtesy of John W. Smith

This article was first published in the University of Illinois Urbana-Champaign newsroom. Read the full story here.

Researchers at Georgia Institute of Technology and the University of Illinois Urbana-Champaign have developed a first-of-its-kind technique called electron videography to capture moving images at the molecular scale. In the first demonstration of the technique, the team took a microscopic moving picture of the delicate dance between proteins and lipids found in cell membranes. The study, “Electron videography of a lipid–protein tango” was published last week in the journal Science Advances.

"This is the first time we are looking at a protein on an individual scale and haven't frozen it or tagged it," says Aditi Das, a corresponding author and associate professor in the School of Chemistry and Biochemistry at Georgia Tech.

Electron microscopy techniques image at the molecular or atomic scale, yielding detailed, nanometer-scale pictures. However, they often rely on samples that have been frozen or fixed in place, leaving scientists to try to infer how molecules move and interact — like trying to map the choreography of a dance sequence from a single frame of film.

"Usually, we have to crystalize or freeze a protein, which poses challenges in capturing high-resolution images of flexible proteins. Alternately, some techniques use a molecular tag that we track, rather than watching the protein itself,” Das says. “In this study we are seeing the protein as it is, behaving how it does in a liquid environment, and seeing how lipids and proteins interact with each other."

The technique can be used to study the dynamics of other biomolecules, breaking free of constraints that have limited microscopy to still images of fixed molecules. In this study, the team examined nanoscale discs of lipid membranes and how they interacted with proteins normally found on the surface of or embedded in cell membranes.

These membrane proteins are significant for medical treatments, and are involved in processes including muscle contraction, brain function, and immune system functions. Moving forward, the researchers plan to use their electron videography technique to study other types of membrane proteins and other classes of molecules and nanomaterials.

 

DOI: 10.1126/sciadv.adk0217

A computational model, based on raw video from electron videography, showing the motion of a nanodisc composed of lipids (red) and a membrane protein (green) in water.  GIF courtesy of John W. Smith
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Contact:
Jess-Hunt Ralston
Director of Communications
College of Sciences
Georgia Tech

IBB Finals Week Snack Break

Stop by the IBB Nerem atrium to enjoy refreshments and coffee to re-charge during finals!

Open to all in the bio-community, while supplies last.

Bio LaunchPad Seminar

Jim West III, MS
Associate Director
BioTools Innovator

REGISTER HERE to participate via Zoom

Aaron Levine Named a Fellow of the American Association for the Advancement of Science

Aaron Levine, Professor and Associate Dean for Research and Outreach

Aaron Levine, associate dean for research and outreach in the Ivan Allen College of Liberal Arts, has been named a fellow of the American Association for the Advancement of Science (AAAS), the world’s largest multidisciplinary scientific society.

Levine is one of 502 people named to the AAAS Fellows Class of 2023, an honor the society has been awarding scientists, engineers, and innovators since 1874 for achievements and efforts on behalf of the advancement of science and its applications. AAAS Fellows are recognized for outstanding contributions to research, teaching, technology, and science communication.

“I am deeply honored to receive this recognition from an organization that has supported and inspired me since I joined as a graduate student in 2006,” said Levine. “I am also encouraged by this acknowledgement that policy and ethics play a key role in bringing groundbreaking biomedical technologies to the people who need them.”

The organization chose Levine, who is also a professor in the School of Public Policy, for his contributions to biomedical research policy — including advancing understanding of how policy debates influence contentious areas of research. His work is at the intersection of ethics, policy, and biomedical research.

“I first became interested in bioethics and science policy while working on the human genome project and witnessing the ethical and policy issues that arose,” said Levine. “I believe addressing societal issues associated with emerging biomedical technologies is critical for these advances to reach their full potential.”

Levine’s work focuses on the development and oversight of  biomedical research and health care areas such as stem cell treatments, assisted reproductive technology, fetal tissue research, and CRISPR.

The author of Cloning: A Beginner’s Guide, an accessible introduction to the science of cloning and the ethical and policy controversies this science inspires, Levine also has a longstanding interest in science communication. He was a member of the 2019-20 cohort of AAAS’ Alan I. Leshner Leadership Institute Public Engagement Fellows.

In addition to his duties in the School and College, Levine also leads ethics and policy research for the National Science Foundation Engineering Research Center for Cell Manufacturing Technologies (CMaT). From 2017 to 2022, he served as CMaT’s co-director for engineering workforce development, helping guide efforts to produce a diverse, well-trained workforce for the biomanufacturing industry.

Levine holds a Ph.D. in public affairs from Princeton University and a master of philosophy from the University of Cambridge, where he was a Churchill Scholar. He earned a bachelor of science in biology from the University of North Carolina at Chapel Hill, where he was a Morehead Scholar.

News Contact

Stephanie N. Kadel
Ivan Allen College of Liberal Arts

Jaydev Desai to Receive the 2024 IEEE RAS George Saridis Leadership Award

Jaydev P. Desai is currently a Professor and BME Distinguished Faculty Fellow in the Wallace H. Coulter Department of Biomedical Engineering at Georgia Tech

Jaydev P. Desai is currently a Professor and BME Distinguished Faculty Fellow in the Wallace H. Coulter Department of Biomedical Engineering at Georgia Tech

Jaydev Desai has been named a recipient of the 2024 IEEE RAS George Saridis Leadership Award in Robotics and Automation from the IEEE Robotics and Automation Society (RAS). Dr. Desai will receive this accolade at the 2024 IEEE International Conference on Robotics and Automation (ICRA2024) to be held in Yokohama Japan.

Named in honor of Professor George Saridis, the award recognizes outstanding contributions of an individual for their exceptional leadership, and dedication that benefit the IEEE Robotics and Automation Society. Desai was nominated by Torsten Kroeger, Chief Science Officer at Intrinsic, who stated, “Jaydev has made pioneering contributions in Medical Robotics and Swarm Robotics in addition to significant leadership and service activities within the IEEE Robotics and Automation Society (RAS)."

Jaydev P. Desai is currently a Professor at Georgia Tech in the Wallace H. Coulter Department of Biomedical Engineering and holds the G.P. “Bud” Peterson and Valerie H. Peterson Faculty Professorship in Pediatric Research. He is the Associate Chair for Undergraduate studies in BME at GT, founding Director of the Georgia Center for Medical Robotics (GCMR), and an Associate Director of the Institute for Robotics and Intelligent Machines (IRIM). He completed his undergraduate studies from the Indian Institute of Technology, Bombay, India, in 1993. He received his MA in Mathematics in 1997 and MSE and Ph.D. in Mechanical Engineering and Applied Mechanics in 1995 and 1998 respectively, all from the University of Pennsylvania. He was also a Post-Doctoral Fellow in the Division of Engineering and Applied Sciences at Harvard University.

He is a recipient of several NIH R01 grants, NSF CAREER award, and was the lead inventor on the “Outstanding Invention in the Physical Science Category” at the University of Maryland, College Park, where he was formerly employed. He is also the recipient of the Ralph R. Teetor Educational Award and the 2021 IEEE Robotics and Automation Society (RAS) Distinguished Service Award. He has been an invited speaker at the National Academy of Sciences “Distinctive Voices” seminar series and also invited to attend the National Academy of Engineering’s U.S. Frontiers of Engineering Symposium. He has over 200 publications, is the founding Editor-in-Chief of the Journal of Medical Robotics Research, and Editor-in-Chief of the four-volume Encyclopedia of Medical Robotics. At 2018 ICRA, his prior work was the finalist for “IEEE RAS Award for the Most Influential Paper from ICRA 1998” (20-years impact). His research group has received several accolades including the best student paper award, best symposium paper award, cover image of IEEE Transactions on Biomedical Engineering, and featured article in the IEEE Transactions on Biomedical Engineering. His current research interests are primarily in the areas of image-guided surgical robotics, pediatric robotics, endovascular robotics, and rehabilitation and assistive robotics. He is a Fellow of IEEE, ASME, and AIMBE.

 

- Christa M. Ernst

Bench2Market Talks

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Securing funding for your early-stage startup can be one of the most challenging aspects of entrepreneurship. In addition to providing funds for your startup to develop and grow, investors often play a key role in company management and strategy. View this interactive panel discussion with investors from various firms to learn what they look for in a startup company and how to position yourself for fundraising success.

Bench2Market Talks

Georgia Tech Partners with The Carter Center to Support Guinea Worm Disease Eradication

A dog in Chad is tethered to prevent the spread of Guinea worm disease. The number of human and animal cases of the disease in Chad dropped by 27% from 2021 to 2022. [Courtesy of Carter Center]

A dog in Chad is tethered to prevent the spread of Guinea worm disease. The number of human and animal cases of the disease in Chad dropped by 27% from 2021 to 2022.

Photo Courtesy of the Carter Center

Georgia Institute of Technology (Georgia Tech) researchers have teamed up with The Carter Center to support dracunculiasis eradication efforts, using mathematical modeling and analytics. Dracunculiasis, or Guinea worm disease (GWD), is caused by the parasite Dracunculus medinensis. Currently, there is no diagnostic test to detect pre-patent infection, no vaccine, and no treatment for GWD. Eradication efforts focus on community-based surveillance, health education, targeted treatment of water sources with larvicide, and most importantly, behavioral changes, such as filtering drinking water and preventing humans and animals, mainly domesticated dogs with emerging worms, from entering and contaminating water sources.  “Given the year-long life-cycle of the disease, mathematical modeling is a valuable tool for fine-tuning interventions and evaluating resource allocation decisions,” said Pinar Keskinocak, professor in the School of Industrial and Systems Engineering (ISyE) and the director of the Center for Health and Humanitarian Systems.

Disease Dynamics

Dracunculus medinensis is a parasite that infects in a vicious cycle. When a human or animal host  ingests either water contaminated with infective Guinea worm larvae or raw or undercooked aquatic animals that harbor the infectious larvae, the larvae mate in the host’s body, and, after 10-14 months, a pregnant female worm that can be as long as one meter emerges slowly and painfully from the host’s body. To seek relief, the host might immerse the affected body part into a water source (e.g., a pond), releasing the worm’s larvae into the water source, contaminating it, and continuing the infection cycle. In particular, worms emerging from dogs can contaminate drinking water sources used by people and in turn, lead to infection of people or other dogs in the community. 

Progress Toward GWD Eradication

GWD eradication efforts worldwide have been supported by the collaboration of many entities, including The Carter Center, ministries of health in endemic countries, WHO, CDC, UNICEF, and others. Since 1986, The Carter Center has led the international Guinea worm eradication campaign, which has eliminated the ancient disease in 16 countries in Africa and Asia. In 2022, Guinea worm was reported in five African countries.

Together with The Carter Center and Chad’s national Guinea Worm Eradication Program, Georgia Tech researchers have developed an agent-based simulation model that incorporates the life-cycle of the worm, daily interactions between dogs and water sources, seasonality of infections, and environmental factors such as rainfall and temperature. The models can also capture the influence of dog movement between multiple regions/water sources. Using these mathematical models in a wide range of simulated scenarios, the researchers evaluated the impact of combinations of interventions (such as water treatment or tethering of dogs). The results from the simulated scenarios suggest that historical levels of interventions in Chad, even when adjusted to regional differences, might not be sufficient to interrupt GWD transmission in dogs within the next five years. Hence, there is a need to improve intervention implementation fidelity, adjust implementation approaches, or implement new interventions.

GWD Eradication Onward

New interventions, such as a diagnostic test that can detect pre-patent infection, could help accelerate the progress toward eradication.  To guide research and development of such a test, WHO initiated the development of target product profiles (TPPs), outlining preferred and minimally acceptable criteria for novel diagnostic tests, which could be, according to WHO, “a game changer in speeding up a global eradiation of the parasite.”

Georgia Tech researchers adapted an agent-based simulation model and evaluated a wide range of scenarios to assess the impact of a new diagnostic test to detect pre-patent infection in dogs on the disease spread. In the mathematical model, each dog is represented by an "agent," which mimics the dog behavior, their interactions with the water source, and the progression of the disease within a dog.

In the absence of a treatment for GWD, the research results quantify the impact of the diagnostic accuracy (sensitivity and specificity) of the test, but also emphasize the importance of rollout decisions and the compliance of dog owners with the recommended tethering practices. “The potential benefits of testing depend on test accuracy, but also on several other factors, e.g., how the test is deployed, and how it affects owners’ behaviors regarding tethering of dogs with positive or negative test results,” said Hannah Smalley, a research engineer in ISyE. “For example, even if the test could detect pre-patent infections in dogs with perfect accuracy, if dogs are not tested frequently enough, or if owners do not consistently tether test-positive dogs, then the impact of such a diagnostic test could be limited.” The timing of when, i.e., how far in advance of worm emergence, the test can detect pre-patent infection is also important. For example, if the test could not only detect pre-patent infection but also accurately estimate the timing of worm emergence, this could increase the owners’ compliance with tethering recommendations during the time period leading to estimated worm emergence, reduce the need for long-term tethering, and reduce the resources (human and financial) needed to support the intervention.

Recommendations from the research are included in the WHO’s TPP for a diagnostic test to detect pre-patent Guinea worm infections in animals. “This important research highlights how a novel diagnostic test that can detect pre-patent Guinea worm infections could help, especially if used in conjunction with existing interventions,” said Adam Weiss [Director of The Carter Center’s Guinea Worm Eradication Program], “and we are looking forward to continuing our collaborations with Georgia Tech as a means to support GWD eradication efforts.”

“Potential Impact of a Diagnostic Test for Detecting Prepatent Guinea Worm Infections in Dogs,” Hannah Smalley, Pinar Keskinocak, Julie Swann, Christopher Hanna, and Adam Weiss, The American Journal of Tropical Medicine and Hygiene, 2024, DOI: https://doi.org/10.4269/ajtmh.23-0534

News Contact

Media Contact: Tess Malone, Senior Research Writer/Editor

tess.malone@gatech.edu

Keiretsu Forum South-East and Texas - April Meeting

The Keiretsu Forum South-East region holds monthly Forum Meetings. Each of our South-East chapters, Atlanta and Palm Beach,  as well as our Mid-Atlantic chapters are welcome to attend. 4-5 pre-screened and vetted investment opportunities are presented by Entrepreneurs in various investment silos such as Technology-Internet, Life Sciences/Health Care-Medical Devices, Consumer Products, Real Estate, Cyber Security, and Social Ventures.